TY - JOUR
T1 - Translating pixels into identification
T2 - Cutting-edge microalgae detection and instance segmentation by leveraging YOLO models
AU - Chong, Jun Wei Roy
AU - Khoo, Kuan Shiong
AU - Ting, Huong Yong
AU - Iwamoto, Koji
AU - Ma, Zengling
AU - Show, Pau Loke
N1 - Publisher Copyright:
© 2026 The Authors.
PY - 2026/5
Y1 - 2026/5
N2 - This study harnesses the advanced capabilities of the YOLOv11 model to enhance real-time detection and instance segmentation of microalgae species, specifically Chlorella vulgaris FSP-E, Chlamydomonas reinhardtii , and Spirulina platensis . Comprehensive evaluations revealed that the original RGB dataset provided better detection accuracy compared to pre-processed datasets. The YOLOv11-n box detection achieved high accuracy with precision, recall, F1 score, mAP50, and mAP50–95 of 0.860 ± 0.000, 0.871 ± 0.002, 0.865 ± 0.001, 0.916 ± 0.002, and 0.727 ± 0.002, respectively. Nonetheless, YOLOv11-n box instance segmentation demonstrated superior performance with precision, recall, F1 score, mAP50, and mAP50–95 of 0.893 ± 0.006, 0.904 ± 0.009, 0.898 ± 0.002, 0.952 ± 0.001 and 0.810 ± 0.005, respectively. On this dataset and hardware, the YOLOv11 slightly outperformed its predecessors, YOLOv5, YOLOv7, and YOLOv8, in terms of comparable overall performance with lower computational cost and faster inference speed, yet still able to deliver high accuracy results on densely populated microalgae samples.
AB - This study harnesses the advanced capabilities of the YOLOv11 model to enhance real-time detection and instance segmentation of microalgae species, specifically Chlorella vulgaris FSP-E, Chlamydomonas reinhardtii , and Spirulina platensis . Comprehensive evaluations revealed that the original RGB dataset provided better detection accuracy compared to pre-processed datasets. The YOLOv11-n box detection achieved high accuracy with precision, recall, F1 score, mAP50, and mAP50–95 of 0.860 ± 0.000, 0.871 ± 0.002, 0.865 ± 0.001, 0.916 ± 0.002, and 0.727 ± 0.002, respectively. Nonetheless, YOLOv11-n box instance segmentation demonstrated superior performance with precision, recall, F1 score, mAP50, and mAP50–95 of 0.893 ± 0.006, 0.904 ± 0.009, 0.898 ± 0.002, 0.952 ± 0.001 and 0.810 ± 0.005, respectively. On this dataset and hardware, the YOLOv11 slightly outperformed its predecessors, YOLOv5, YOLOv7, and YOLOv8, in terms of comparable overall performance with lower computational cost and faster inference speed, yet still able to deliver high accuracy results on densely populated microalgae samples.
KW - Detection
KW - Instance segmentation
KW - Microalgae
KW - YOLOv11
KW - YOLOv7
KW - YOLOv8
UR - https://www.scopus.com/pages/publications/105037030168
U2 - 10.1016/j.ecoinf.2026.103752
DO - 10.1016/j.ecoinf.2026.103752
M3 - Article
AN - SCOPUS:105037030168
SN - 1574-9541
VL - 95
JO - Ecological Informatics
JF - Ecological Informatics
M1 - 103752
ER -