TY - JOUR
T1 - Microalgae with artificial intelligence
T2 - A digitalized perspective on genetics, systems and products
AU - Teng, Sin Yong
AU - Yew, Guo Yong
AU - Sukačová, Kateřina
AU - Show, Pau Loke
AU - Máša, Vítězslav
AU - Chang, Jo Shu
N1 - Funding Information:
The research leading to these results has received funding from the Ministry of Education, Youth and Sports of the Czech Republic under OP RDE grant number CZ.02.1.01/0.0/0.0/16_026/0008413 “Strategic Partnership for Environmental Technologies and Energy Production”. This work was also supported by the Fundamental Research Grant Scheme, Malaysia [ FRGS/1/2019/STG05/UNIM/02/2 ] and MyPAIR-PHC-Hibiscus Grant [ MyPAIR/1/2020/STG05/UNIM/1 ].
Publisher Copyright:
© 2020
PY - 2020/11/15
Y1 - 2020/11/15
N2 - With recent advances in novel gene-editing tools such as RNAi, ZFNs, TALENs, and CRISPR-Cas9, the possibility of altering microalgae toward designed properties for various application is becoming a reality. Alteration of microalgae genomes can modify metabolic pathways to give elevated yields in lipids, biomass, and other components. The potential of such genetically optimized microalgae can give a “domino effect” in further providing optimization leverages down the supply chain, in aspects such as cultivation, processing, system design, process integration, and revolutionary products. However, the current level of understanding the functional information of various microalgae gene sequences is still primitive and insufficient as microalgae genome sequences are long and complex. From this perspective, this work proposes to link up this knowledge gap between microalgae genetic information and optimized bioproducts using Artificial Intelligence (AI). With the recent acceleration of AI research, large and complex data from microalgae research can be properly analyzed by combining the cutting-edge of both fields. In this work, the most suitable class of AI algorithms (such as active learning, semi-supervised learning, and meta-learning) are discussed for different cases of microalgae applications. This work concisely reviews the current state of the research milestones and highlight some of the state-of-art that has been carried out, providing insightful future pathways. The utilization of AI algorithms in microalgae cultivation, system optimization, and other aspects of the supply chain is also discussed. This work opens the pathway to a digitalized future for microalgae research and applications.
AB - With recent advances in novel gene-editing tools such as RNAi, ZFNs, TALENs, and CRISPR-Cas9, the possibility of altering microalgae toward designed properties for various application is becoming a reality. Alteration of microalgae genomes can modify metabolic pathways to give elevated yields in lipids, biomass, and other components. The potential of such genetically optimized microalgae can give a “domino effect” in further providing optimization leverages down the supply chain, in aspects such as cultivation, processing, system design, process integration, and revolutionary products. However, the current level of understanding the functional information of various microalgae gene sequences is still primitive and insufficient as microalgae genome sequences are long and complex. From this perspective, this work proposes to link up this knowledge gap between microalgae genetic information and optimized bioproducts using Artificial Intelligence (AI). With the recent acceleration of AI research, large and complex data from microalgae research can be properly analyzed by combining the cutting-edge of both fields. In this work, the most suitable class of AI algorithms (such as active learning, semi-supervised learning, and meta-learning) are discussed for different cases of microalgae applications. This work concisely reviews the current state of the research milestones and highlight some of the state-of-art that has been carried out, providing insightful future pathways. The utilization of AI algorithms in microalgae cultivation, system optimization, and other aspects of the supply chain is also discussed. This work opens the pathway to a digitalized future for microalgae research and applications.
KW - Artificial intelligence
KW - Genetic engineering
KW - Microalgae
KW - Process integration
KW - Process optimization
KW - System design
UR - http://www.scopus.com/inward/record.url?scp=85091023396&partnerID=8YFLogxK
U2 - 10.1016/j.biotechadv.2020.107631
DO - 10.1016/j.biotechadv.2020.107631
M3 - Review article
C2 - 32931875
AN - SCOPUS:85091023396
SN - 0734-9750
VL - 44
JO - Biotechnology Advances
JF - Biotechnology Advances
M1 - 107631
ER -