Expressionview: visualization of quantitative trait loci and gene-expression data in Ensembl.

Gertrud Fischer; Saleh M. Ibrahim; Gudrun A. Brockmann; Jens Pahnke; Ezio Bartocci; Hans Jürgen Thiesen; Pablo Serrano-Fernández; Steffen Möller

Expressionview: visualization of quantitative trait loci and gene-expression data in Ensembl.

Gertrud Fischer, Saleh M. Ibrahim, Gudrun A. Brockmann, Jens Pahnke, Ezio Bartocci, Hans Jürgen Thiesen, Pablo Serrano-Fernández, Steffen Möller

College of Medicine and Health Sciences

Universität Rostock

Research output: Contribution to journal › Article › peer-review

23 Scopus citations

Abstract

We present here a software tool for combined visualization of gene-expression data and quantitative trait loci (QTL). The application is implemented as an extension to the Ensembl project and caters for a direct transition from microarray experiments of gene or protein expression levels to the genomic context of individual genes and QTL. It supports the visualization of gene clusters and the selection of functional candidate genes in the context of research on complex traits.

Original language	British English
Pages (from-to)	R77
Journal	Genome Biology
Volume	4
Issue number	11
State	Published - 2003

Cite this

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title = "Expressionview: visualization of quantitative trait loci and gene-expression data in Ensembl.",

abstract = "We present here a software tool for combined visualization of gene-expression data and quantitative trait loci (QTL). The application is implemented as an extension to the Ensembl project and caters for a direct transition from microarray experiments of gene or protein expression levels to the genomic context of individual genes and QTL. It supports the visualization of gene clusters and the selection of functional candidate genes in the context of research on complex traits.",

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AU - Fischer, Gertrud

AU - Ibrahim, Saleh M.

AU - Brockmann, Gudrun A.

AU - Pahnke, Jens

AU - Bartocci, Ezio

AU - Thiesen, Hans Jürgen

AU - Serrano-Fernández, Pablo

AU - Möller, Steffen

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AB - We present here a software tool for combined visualization of gene-expression data and quantitative trait loci (QTL). The application is implemented as an extension to the Ensembl project and caters for a direct transition from microarray experiments of gene or protein expression levels to the genomic context of individual genes and QTL. It supports the visualization of gene clusters and the selection of functional candidate genes in the context of research on complex traits.

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SP - R77

JO - Genome Biology

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Expressionview: visualization of quantitative trait loci and gene-expression data in Ensembl.

Abstract

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