TY - JOUR
T1 - Clinically verified hybrid deep learning system for retinal ganglion cells aware grading of glaucomatous progression
AU - Raja, Hina
AU - Hassan, Taimur
AU - Akram, Muhammad Usman
AU - Werghi, Naoufel
N1 - Funding Information:
Manuscript received June 28, 2020; revised August 28, 2020; accepted October 3, 2020. Date of publication October 12, 2020; date of current version June 18, 2021. This work was supported by a research fund from Khalifa University: Ref: CIRA-2019-047. (Hina Raja and Taimur Hassan are co-first authors.) (Corresponding author: Taimur Hassan.) Hina Raja and Muhammad Usman Akram are with the Department of Computer and Software Engineering, National University of Sciences and Technology.
Publisher Copyright:
© 1964-2012 IEEE.
PY - 2021/7
Y1 - 2021/7
N2 - Objective: Glaucoma is the second leading cause of blindness worldwide. Glaucomatous progression can be easily monitored by analyzing the degeneration of retinal ganglion cells (RGCs). Many researchers have screened glaucoma by measuring cup-to-disc ratios from fundus and optical coherence tomography scans. However, this paper presents a novel strategy that pays attention to the RGC atrophy for screening glaucomatous pathologies and grading their severity. Methods: The proposed framework encompasses a hybrid convolutional network that extracts the retinal nerve fiber layer, ganglion cell with the inner plexiform layer and ganglion cell complex regions, allowing thus a quantitative screening of glaucomatous subjects. Furthermore, the severity of glaucoma in screened cases is objectively graded by analyzing the thickness of these regions. Results: The proposed framework is rigorously tested on publicly available Armed Forces Institute of Ophthalmology (AFIO) dataset, where it achieved the F1 score of 0.9577 for diagnosing glaucoma, a mean dice coefficient score of 0.8697 for extracting the RGC regions and an accuracy of 0.9117 for grading glaucomatous progression. Furthermore, the performance of the proposed framework is clinically verified with the markings of four expert ophthalmologists, achieving a statistically significant Pearson correlation coefficient of 0.9236. Conclusion: An automated assessment of RGC degeneration yields better glaucomatous screening and grading as compared to the state-of-the-art solutions. Significance: An RGC-aware system not only screens glaucoma but can also grade its severity and here we present an end-to-end solution that is thoroughly evaluated on a standardized dataset and is clinically validated for analyzing glaucomatous pathologies.
AB - Objective: Glaucoma is the second leading cause of blindness worldwide. Glaucomatous progression can be easily monitored by analyzing the degeneration of retinal ganglion cells (RGCs). Many researchers have screened glaucoma by measuring cup-to-disc ratios from fundus and optical coherence tomography scans. However, this paper presents a novel strategy that pays attention to the RGC atrophy for screening glaucomatous pathologies and grading their severity. Methods: The proposed framework encompasses a hybrid convolutional network that extracts the retinal nerve fiber layer, ganglion cell with the inner plexiform layer and ganglion cell complex regions, allowing thus a quantitative screening of glaucomatous subjects. Furthermore, the severity of glaucoma in screened cases is objectively graded by analyzing the thickness of these regions. Results: The proposed framework is rigorously tested on publicly available Armed Forces Institute of Ophthalmology (AFIO) dataset, where it achieved the F1 score of 0.9577 for diagnosing glaucoma, a mean dice coefficient score of 0.8697 for extracting the RGC regions and an accuracy of 0.9117 for grading glaucomatous progression. Furthermore, the performance of the proposed framework is clinically verified with the markings of four expert ophthalmologists, achieving a statistically significant Pearson correlation coefficient of 0.9236. Conclusion: An automated assessment of RGC degeneration yields better glaucomatous screening and grading as compared to the state-of-the-art solutions. Significance: An RGC-aware system not only screens glaucoma but can also grade its severity and here we present an end-to-end solution that is thoroughly evaluated on a standardized dataset and is clinically validated for analyzing glaucomatous pathologies.
KW - Deep Learning
KW - Glaucoma
KW - Optical Coherence Tomography (OCT)
KW - Retinal Ganglion Cells (RGCs)
KW - Retinal Nerve Fiber Layer (RNFL)
UR - https://www.scopus.com/pages/publications/85108582948
U2 - 10.1109/TBME.2020.3030085
DO - 10.1109/TBME.2020.3030085
M3 - Article
C2 - 33044925
AN - SCOPUS:85108582948
SN - 0018-9294
VL - 68
SP - 2140
EP - 2151
JO - IEEE Transactions on Biomedical Engineering
JF - IEEE Transactions on Biomedical Engineering
IS - 7
M1 - 9220802
ER -